Reproducible Data Analysis Resources

Robert (Bob) Turner
7 December 2020 12:00

This blog post provides a copy of my recent talk at the Royal Microscopical Society’s Virtual Data Analysis in Atomic Force Microscopy Meeting (Event Page): How can we make AFM data analysis more open and reproducible?

I’ve also put together what I hope will be some useful links:

If you’re a researcher at the University of Sheffield…

Collaborate with or get help from Research Software Engineers at the University of Sheffield:

Work with Research Librarians on data management:

Get a wide range of IT Support services:

Put your data on Figshare:

Advice on intellectual property (from a commercialisation prespective):

Reproducibility…

A readable survey report on reproducibility:

The UK government roadmap (Summer 2020):

International views on digital skills training for reproducibility:

Detailled help with reproducible data science:

Tools for Open Science using the R programming language:

A key article on what constitutes reproducible research:

Open Data…

Making data available and accessible to people and computers:

Repository for a wide range of data types:

Repositories for specific data types in biomedicine:

Help with finding the right license for your work:

Publishing / Impact…

“Nature”’s rules for code:

Recognising more diverse research outputs:

Research Software Engineering…

RSE Communities:

Organisation supporting better research software:

Applying FAIR-like priniciples to code:

Example completed software checklist:

Training / Learning…

Leading organisation for software and data science training courses:

Blog post on ways of getting into python:

Contact Us

For queries relating to collaborating with the RSE team on projects: rse@sheffield.ac.uk

Information and access to JADE II and Bede.

Join our mailing list so as to be notified when we advertise talks and workshops by subscribing to this Google Group.

Queries regarding free research computing support/guidance should be raised via our Code clinic or directed to the University IT helpdesk.